Timeline
06/11/10:
- 19:05 Changeset [408] by
- Convert all db calls to follow canonical pattern of resource usage.
- 16:48 Changeset [407] by
- 16:47 Changeset [406] by
- 16:39 Changeset [405] by
- start of connection pooling
- 16:35 Changeset [404] by
06/10/10:
- 15:08 Changeset [403] by
- Quality Control tool for checking quality of new BridgeDerby builds. Put …
- 13:16 Changeset [402] by
- Fixed failed test in synergizer by not supporting xrefExists anymore. This …
06/09/10:
- 13:03 Ticket #69 (IDMapper for mirbase, to map between mature<->immature miRNA) created by
- Request for an IDMapper for mirbase. This is in particularly useful …
06/04/10:
- 19:03 Changeset [401] by
- only ToDo? updated (was a mistake)
- 17:09 Changeset [400] by
- mavenized ..webservice.synergizer (test fails due to the …
- 16:55 Ticket #68 (error in org.bridgedb.webservice.synergizer.Tests) created by
- The test fails, probably, because the synergizer service does not support …
- 06:26 Changeset [399] by
06/03/10:
- 01:59 Changeset [398] by
- updating HUGO
06/02/10:
- 22:19 Changeset [397] by
- Need to handle case where user doesn't have config file.
- 21:12 Changeset [396] by
- for ant (run within the module) and for maven the files need to be located …
- 21:12 Changeset [395] by
- using maven seems to instantiate the server differently than with ant -- …
- 21:11 Changeset [394] by
- add new (maven) modules: rdb and server
- 21:10 Changeset [393] by
- add new (maven) modules: rdb and server
- 21:10 Changeset [392] by
- add new (maven) modules: rdb and server
- 20:57 Ticket #67 (Make Organism enum extensible) created by
- Make it possible to extend the organism enum (and read it from …
- 20:43 Changeset [391] by
- Previously missing text file added; Also - generated classes and other …
06/01/10:
- 15:46 Ticket #66 (Entrez IDMapper) created by
- Entrez Provides a webservice that can also do identifier mapping. There …
- 15:38 Changeset [390] by
- test
- 15:37 Changeset [389] by
- test
- 13:08 Ticket #65 (ChEBI identifier has wrong structure) created by
- The ChEBI identifiers in the bridgedb database are currently a number …
- 07:03 Changeset [388] by
- 06:07 Changeset [387] by
- Adding KEGG Genes and BioCyc? datasources
05/31/10:
- 23:27 Changeset [386] by
- 23:24 Changeset [385] by
- 23:22 Changeset [384] by
- 23:22 Changeset [383] by
- 23:20 Changeset [382] by
- 23:20 Changeset [381] by
- 23:19 Changeset [380] by
- 23:19 Changeset [379] by
- 22:44 Changeset [378] by
- adding Mtuberculosis
- 07:26 Changeset [377] by
- updating to work on plato cluster
- 07:25 Changeset [376] by
- setting to older Derby bin; commenting out debug line
- 05:46 Changeset [375] by
- fixing export syntax
- 05:37 Changeset [374] by
- switching back to export from setenv…
- 03:28 Ticket #64 (compare size and performance benefits of using integers in place of ...) created by
- Will replace ensembl ids in Link table with integers to see if there are …
- 03:20 Ticket #63 (parse synonyms to separate attr entries) closed by
- fixed
- 03:20 Ticket #63 (parse synonyms to separate attr entries) created by
- For a given gene, multiple synonyms should be stored in Attr table as …
- 03:02 Ticket #62 (new datasource: gene wiki) closed by
- fixed
- 03:01 Ticket #54 (Incorrect case for Zea mays) closed by
- fixed
- 03:01 Changeset [373] by
- added Zea mays, fixed typos and whitespace issues, fix #54
- 02:57 Changeset [372] by
- corrected case error on Zea Mays; fix #54
- 02:42 Changeset [371] by
- removed debug statements
- 02:35 Changeset [370] by
- modified handling of species aliases for latest API
- 01:52 Changeset [369] by
- updated to work on plato cluster
- 01:52 Changeset [368] by
- updated to work on plato cluster
05/30/10:
- 02:42 Changeset [367] by
- Added Gene Wiki as a datasource
05/29/10:
- 23:46 Changeset [366] by
- fixed table import for plato
- 23:38 Changeset [365] by
- Added HGNC symbol as primary id
- 23:27 Changeset [364] by
- Added Gene Wiki support
05/26/10:
- 23:54 Ticket #62 (new datasource: gene wiki) created by
- I propose creating a new datasource in our next round of databases that …
05/21/10:
- 01:02 Changeset [363] by
- "Mavenized" are 6 modules: org.bridgedb, org.bridgedb.bio, …
05/18/10:
- 21:34 Changeset [362] by
- switch from 'export' to 'setenv' for plato
- 19:27 Changeset [361] by
- added M.tuberculosis
05/16/10:
- 01:04 Changeset [360] by
- added tuberculosis
- 01:03 Changeset [359] by
- fixed mysql-quotes bug
- 01:02 Changeset [358] by
- updated tuberculosis entry
- 01:01 Changeset [357] by
- added pig and tuberculosis to run list
- 00:52 Changeset [356] by
- fixed attr table bug
- 00:34 Changeset [355] by
- updated dir references for plato
- 00:28 Changeset [354] by
- updated to work on plato
05/15/10:
- 21:10 Changeset [353] by
- further adapted to work with plato, plus mods to handling of GO when …
- 20:10 Changeset [352] by
- updating specification of home directory for use on plato
- 20:07 Changeset [351] by
- updated bacteria script and substituted use of tmp dir
05/14/10:
- 01:35 Changeset [350] by
- added sus scrofa (pig)
- 00:48 Changeset [349] by
- adapted to work with new 'genmapp_' prefixed databases
05/13/10:
- 02:40 Changeset [348] by
- without commented out lines
05/12/10:
- 22:24 Ticket #61 (URLEncoder exception in bridgedb-vanted) created by
- URLEncoder throws a null pointer exception when using BridgeDb?-vanted …
- 22:17 Changeset [347] by
- Fixed NPE in URLEncoder
- 21:22 Changeset [346] by
- final eclipse project file
- 17:55 EclipseSetupGuide edited by
- (diff)
- 17:47 Changeset [345] by
- More eclipse project files
- 17:41 EclipseSetupGuide edited by
- (diff)
- 17:40 EclipseSetupGuide edited by
- (diff)
- 17:34 DownloadBridgeDb edited by
- (diff)
- 17:34 DownloadBridgeDb edited by
- (diff)
- 17:24 Changeset [344] by
- Fixed project names
- 17:09 EclipseSetupGuide edited by
- (diff)
- 17:08 EclipseSetupGuide created by
- 17:00 WikiStart edited by
- (diff)
- 16:57 Changeset [343] by
- Checking in eclipse project and classpath files, a little experiment
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