Changeset 369 for trunk/dbbuilder/src/org/bridgedb/download/bacteria_download.sh

Timestamp:

05/31/10 01:52:56 (2 years ago)

Author:

AlexanderPico

Message:

updated to work on plato cluster

Files:

• trunk/dbbuilder/src/org/bridgedb/download/bacteria_download.sh (modified) (1 diff)

trunk/dbbuilder/src/org/bridgedb/download/bacteria_download.sh

@@ -44 +44 @@
 
   #create local mysql db
-  echo "create database if not exists genmapp_${mysql_db_name_local}" | ${mysql} -u genmapp -pfun4genmapp
+  echo "create database if not exists ${mysql_db_name_local}" | ${mysql} -u genmapp -pfun4genmapp
   #create schema
-  ${mysql} -u genmapp -pfun4genmapp genmapp_${mysql_db_name_local} < ./${mysql_db_name}.sql
+  ${mysql} -u genmapp -pfun4genmapp ${mysql_db_name_local} < ./${mysql_db_name}.sql
    # place in own scope, due to "cd" command
   (
     cd ./${mysql_db_name}; for table_name in *.txt
     do
-      ${mysqlimport} -u genmapp -pfun4genmapp genmapp_${mysql_db_name_local} `pwd`/${table_name}
+      ${mysqlimport} -u genmapp -pfun4genmapp ${mysql_db_name_local} `pwd`/${table_name}
     done
   )